Update...
I located the Fuel Filter, it is mounted on the Drivers Side Chassis just in fron of the rear axle and in line with the bush in the lower control arm, this is near the rear of the tank and the fuel lines exit the tank to the rear.
I have run the motho through and taken the car for a few short drives to help run the fuel through a bit. There was still no noticeable change, so I removed the fuel filter (looked to be the original) there was quite a lot of black sediment in the filter and the fuel appeared a little cloudy, this would indicate to me that there is a little water in the tank and by all accounts, the metho has blended with both the fuel and the water to help drag it through the engine, a little rough idling will undoubtedly continue as a result.
I have added a bottle of injector cleaner to the mix today, that should help to clean out any debris that has made it past the old fuel filter and maybe clogged or begun to clog an injector.
After adding both the metho and injector cleaner and changing the fuel filter, I took the Ute for another drive, it appeared to have more pick up from a standing start, and seemed to be idling a little better, I will see how it is in the morning from cold and after sitting overnight, as this was when it was most noticeable.